library(COVID19)
wb <- c("gdp" = "NY.GDP.MKTP.CD", "hosp_beds" = "SH.MED.BEDS.ZS",
"Over65" = "SP.POP.65UP.TO.ZS",
"deaths_cd" = "SH.DTH.COMM.ZS",
"mortality" ="SP.DYN.AMRT.MA",
"Infant_deaths"="SH.DTH.IMRT",
"Under_5_deaths" = "SH.DTH.MORT",
"Suicide" = "SH.STA.SUIC.P5"
)
gmr <- "https://www.gstatic.com/covid19/mobility/Global_Mobility_Report.csv"
d <- covid19(wb = wb)
## We have invested a lot of time and effort in creating COVID-19 Data Hub, please cite the following when using it:
##
## Guidotti, E., Ardia, D., (2020), "COVID-19 Data Hub", Journal of Open
## Source Software 5(51):2376, doi: 10.21105/joss.02376.
##
## A BibTeX entry for LaTeX users is
##
## @Article{,
## title = {COVID-19 Data Hub},
## year = {2020},
## doi = {10.21105/joss.02376},
## author = {Emanuele Guidotti and David Ardia},
## journal = {Journal of Open Source Software},
## volume = {5},
## number = {51},
## pages = {2376},
## }
##
## To retrieve citation and metadata of the data sources see ?covid19cite. To hide this message use 'verbose = FALSE'.
d %>% filter(date< Sys.Date()-7) -> d
d %>% group_by(iso_alpha_3) -> d
d %>%arrange(date) %>% mutate(New_cases = confirmed - lag(confirmed, default = first(confirmed))) -> d
d %>% mutate(New_deaths = deaths - lag(deaths, default = first(deaths))) %>% arrange(deaths) -> d
d %>% mutate(New_tests = tests - lag(tests, default = first(tests))) %>% arrange(tests) -> d
d %>% filter(administrative_area_level_1 =="United Kingdom") -> UK
aqm::dt(UK)